研究成果 - 上田　貴志

Neofunctionalization of VAMP7 opened up a plant-unique vacuolar transport pathway

Current Biology    2025年06月

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REAP1/AtSWAP70 Integrates RAB5 and ROP Signaling During Sexual Reproduction

2025年01月30日

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Genetic Analysis ofArabidopsisAutophagy-Related 8 Family Proteins Reveals Their Redundant and Regulatory Roles in Plant Autophagy

2025年01月02日

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TYPHON proteins are RAB-dependent mediators of the trans-Golgi network secretory pathway

The Plant Cell    2024年12月23日

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Amyloplasts are necessary for full gravitropism in thallus of Marchantia polymorpha

2024年11月21日

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Retrieval from vacuolar/endosomal compartments underpinning neofunctionalization of SNARE in plants

2024年10月30日

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Characterization of Subcellular Dynamics of Sterol Methyltransferases Clarifies Defective Cell Division in smt2 smt3, a C-24 Ethyl Sterol-Deficient Mutant of Arabidopsis

Biomolecules    2024年07月19日

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Analysis of Plant-Specific ANTH Domain–Containing Protein in Marchantia polymorpha

Plant And Cell Physiology    2023年12月06日

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Gaining New Insights in Plant Biology through Human–Machine Collaboration

Plant And Cell Physiology    2023年12月06日

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Harnessing Deep Learning to Analyze Cryptic Morphological Variability of Marchantia polymorpha

Plant And Cell Physiology    2023年12月06日

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The SYP123–VAMP727 SNARE complex delivers secondary cell wall components for root hair shank hardening in Arabidopsis

The Plant Cell    2023年11月30日

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Harnessing Deep Learning to Analyze Cryptic Morphological Variability ofMarchantia polymorpha

2023年06月05日

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Autophagy regulates plastid reorganization during spermatogenesis in the liverwort Marchantia polymorpha

Frontiers in Plant Science    2023年02月09日

ISSN： 1664-462X

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Phylogenetic distribution and expression pattern analyses identified a divergent basal body assembly protein involved in land plant spermatogenesis

New Phytologist    2022年11月

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Autophagy regulates organelle reorganization during spermiogenesis in the liverwort Marchantia polymorpha

Autophagy    2022年10月03日

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Membrane trafficking functions of the ANTH/ENTH/VHS domain‐containing proteins in plants

FEBS Letters    2022年09月

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Remodeling of organelles and microtubules during spermiogenesis in the liverwort Marchantia polymorpha

Development    2022年08月01日

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Plant-specific armadillo repeat kinesin directs organelle transport and microtubule convergence to promote tip growth

2022年07月08日

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Dynamic rearrangement and autophagic degradation of mitochondria during spermiogenesis in the liverwort Marchantia polymorpha

Cell Reports    2022年06月

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Editorial Feature: Meet the PCP Editor – Takashi Ueda

Plant and Cell Physiology    2021年10月01日

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Bryophyte spermiogenesis occurs through multimode autophagic and nonautophagic degradation

2021年08月19日

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Phylogenetic distribution and expression pattern analyses identified a divergent basal body assembly protein involved in land plant spermatogenesis

2021年07月26日

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Remodeling of organelles and microtubules during spermiogenesis in the liverwort Marchantia polymorpha

[]    2021年07月12日

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Excess sterol accumulation affects seed morphology and physiology in Arabidopsis thaliana

Plant Signaling & Behavior    2021年04月03日

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Cargo sorting zones in the trans-Golgi network visualized by super-resolution confocal live imaging microscopy in plants

Nature Communications    2021年03月

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The SYP123-VAMP727 SNARE complex is involved in the delivery of inner cell wall components to the root hair shank in Arabidopsis

2020年12月28日

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The liverwort oil body is formed by redirection of the secretory pathway

Nature Communications    2020年12月01日

ISSN： 2041-1723

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The Arabidopsis V-ATPase is localized to the TGN/EE via a seed plant-specific motif

eLife    2020年11月25日

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Longin R-SNARE is retrieved from the plasma membrane by ANTH domain-containing proteins in Arabidopsis

Proceedings of the National Academy of Sciences    2020年10月06日

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Oil Body Formation in Marchantia polymorpha Is Controlled by MpC1HDZ and Serves as a Defense against Arthropod Herbivores

Current Biology    2020年07月

ISSN： 0960-9822

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The Arabidopsis V-ATPase is localized to the TGN/EE via a seed plant specific motif and acts in a partially redundant manner with the tonoplast enzyme

2020年06月30日

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Role of Autophagy in Male Reproductive Processes in Land Plants

Frontiers in Plant Science    2020年06月17日

ISSN： 1664-462X

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Oil body formation inMarchantia polymorphais controlled by MpC1HDZ and serves as a defense against arthropod herbivores

2020年03月03日

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Switching secretory pathway direction for organelle acquisition in plants

2020年03月02日

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Deep Imaging Analysis in VISUAL Reveals the Role of YABBY Genes in Vascular Stem Cell Fate Determination

Plant and Cell Physiology    2020年02月01日

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Characterization of ancestral myosin XI from Marchantia polymorpha by heterologous expression in Arabidopsis thaliana

Plant Journal    2020年

ISSN： 1365313X 09607412

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Purification and Interaction Analysis of a Plant-Specific RAB5 Effector by In Vitro Pull-Down Assay

Methods in Molecular Biology    2020年

ISSN： 19406029 10643745

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HIGH STEROL ESTER 1 is a key factor in plant sterol homeostasis

Nature Plants    2019年11月

ISSN： 2055-0278

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Protamines from liverwort are produced by post-translational cleavage and C-terminal di-aminopropanelation of several male germ-specific H1 histones

Journal of Biological Chemistry    2019年11月

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The RopGEF KARAPPO Is Essential for the Initiation of Vegetative Reproduction in Marchantia polymorpha

Current Biology    2019年10月

ISSN： 0960-9822

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Enrichment of Phosphatidylinositol 4,5-Bisphosphate in the Extra-Invasive Hyphal Membrane Promotes Colletotrichum Infection of Arabidopsis thaliana

Plant and Cell Physiology    2019年07月01日

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ANTH domain-containing proteins are required for the pollen tube plasma membrane integrity via recycling ANXUR kinases

Communications Biology    2018年09月26日

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Integration of two RAB5 groups during endosomal transport in plants

eLife    2018年05月11日

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Involvement of S-type anion channels in disease resistance against an oomycete pathogen in Arabidopsis seedlings

Communicative & Integrative Biology    2018年05月04日

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RAB GTPases in the Basal Land Plant Marchantia polymorpha

Plant and Cell Physiology    2018年04月01日

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Distinct sets of tethering complexes, SNARE complexes, and Rab GTPases mediate membrane fusion at the vacuole in Arabidopsis.

Proceedings of the National Academy of Sciences of the United States of America    2018年03月

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A Golgi-released subpopulation of the trans-Golgi network mediates protein secretion in Arabidopsis

Plant Physiology    2018年

ISSN： 0032-0889

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A whole-cell electron tomography model of vacuole biogenesis in Arabidopsis root cells

Nature Plants    2018年

ISSN： 2055-0278

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Cell wall accumulation of fluorescent proteins derived from a trans-Golgi cisternal membrane marker and paramural bodies in interdigitated Arabidopsis leaf epidermal cells

Protoplasma    2017年

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Constitutive activation of plant-specific RAB5 GTPase confers increased resistance against adapted powdery mildew fungus

Plant Biotechnology    2017年

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Dynamic reorganization of the endomembrane system during spermatogenesis in Marchantia polymorpha

Journal of Plant Research    2017年

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Exocytic trafficking pathways in plants: whyand how they are redirected

New Phytologist    2017年

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Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome

Cell    2017年

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MONENSIN SENSITIVITY1 (MON1)/CALCIUM CAFFEINE ZINC SENSITIVITY1 (CCZ1)-Mediated Rab7 Activation Regulates Tapetal Programmed Cell Death and Pollen Development

Plant Physiology    2017年

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The GYF domain protein PSIG1 dampens the induction of cell death during plant-pathogen interactions

Plos Genetics    2017年

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The trans-Golgi Network and the Golgi Stacks Behave Independently During Regeneration After Brefeldin A Treatment in Tobacco BY-2 Cells

Plant and Cell Physiology    2017年

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Triphosphate Tunnel Metalloenzyme Function in Senescence Highlights a Biological Diversification of This Protein Superfamily

Plant Physiology    2017年

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AtNHX5 and AtNHX6 Are Required for the Subcellular Localization of the SNARE Complex That Mediates the Trafficking of Seed Storage Proteins in Arabidopsis

Plos One    2016年

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Clathrin-dependent endocytosis is required for immunity mediated by pattern recognition receptor kinases

Proceedings of the National Academy of Sciences of the United States of America    2016年

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DRP1-Dependent Endocytosis is Essential for Polar Localization and Boron-Induced Degradation of the Borate Transporter BOR1 in Arabidopsis thaliana

Plant and Cell Physiology    2016年

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Distribution of RAB5-positive multivesicular endosomes and the trans-Golgi network in root meristematic cells of Arabidopsis thaliana

Plant Biotechnology    2016年

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ENDOSOMAL RAB EFFECTOR WITH PX-DOMAIN, an Interacting Partner of RAB5 GTPases, Regulates Membrane Trafficking to Protein Storage Vacuoles in Arabidopsis

Plant Cell    2016年

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Functional analyses of the plant-specific C-terminal region of VPS9a: the activating factor for RAB5 in Arabidopsis thaliana

Journal of Plant Research    2016年

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Modulation of Plant RAB GTPase-Mediated Membrane Trafficking Pathway at the Interface Between Plants and Obligate Biotrophic Pathogens

Plant and Cell Physiology    2016年

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SNARE Molecules in Marchantia polymorpha: Unique and Conserved Features of the Membrane Fusion Machinery

Plant and Cell Physiology    2016年

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The Naming of Names: Guidelines for Gene Nomenclature in Marchantia

Plant and Cell Physiology    2016年

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Anthocyanin Vacuolar Inclusions Form by a Microautophagy Mechanism

Plant Cell    2015年

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Guanine nucleotide exchange factor 2 for Rab5 proteins coordinated with GLUP6/GEF regulates the intracellular transport of the proglutelin from the Golgi apparatus to the protein storage vacuole in rice endosperm

Journal of Experimental Botany    2015年

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Molecular Analysis and Localization of CaARA7 a Conventional RAB5 GTPase from Characean Algae

Traffic    2015年

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Phosphatidylinositol 3-Kinase and 4-Kinase Have Distinct Roles in Intracellular Trafficking of Cellulose Synthase Complexes in Arabidopsis thaliana

Plant and Cell Physiology    2015年

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Roles of membrane trafficking in plant cell wall dynamics

Frontiers in Plant Science    2015年

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The Plant-Specific RAB5 GTPase ARA6 is Required for Starch and Sugar Homeostasis in Arabidopsis thaliana

Plant and Cell Physiology    2015年

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A Unique HEAT Repeat-Containing Protein SHOOT GRAVITROPISM6 is Involved in Vacuolar Membrane Dynamics in Gravity-Sensing Cells of Arabidopsis Inflorescence Stem

Plant and Cell Physiology    2014年

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Activation of the Rab7 GTPase by the MON1-CCZ1 Complex Is Essential for PVC-to-Vacuole Trafficking and Plant Growth in Arabidopsis

Plant Cell    2014年

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Analysis of Rab GTPase-Effector Interactions by Bimolecular Fluorescence Complementation

Plant Endosomes: Methods and Protocols    2014年

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Cellulase in Cellulose Synthase: A Cat among the Pigeons?

Plant Physiology    2014年

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Dynamic Behavior of the trans-Golgi Network in Root Tissues of Arabidopsis Revealed by Super-Resolution Live Imaging

Plant and Cell Physiology    2014年

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Interactomics of Qa-SNARE in Arabidopsis thaliana

Plant and Cell Physiology    2014年

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Membrane Trafficking Pathways and their Roles in Plant-Microbe Interactions

Plant and Cell Physiology    2014年

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Plant Vacuolar Trafficking Occurs through Distinctly Regulated Pathways

Current Biology    2014年

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Plant vacuolar trafficking driven by RAB and SNARE proteins

Current Opinion in Plant Biology    2014年

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Sex-Specific Posttranslational Regulation of the Gamete Fusogen GCS1 in the Isogamous Volvocine Alga Gonium pectorale

Eukaryotic Cell    2014年

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A Guanine Nucleotide Exchange Factor for Rab5 Proteins Is Essential for Intracellular Transport of the Proglutelin from the Golgi Apparatus to the Protein Storage Vacuole in Rice Endosperm

Plant Physiology    2013年

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ARA7(Q69L) expression in transgenic Arabidopsis cells induces the formation of enlarged multivesicular bodies

Journal of Experimental Botany    2013年

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Arabidopsis RABA1 GTPases are involved in transport between the trans-Golgi network and the plasma membrane, and are required for salinity stress tolerance

Plant Journal    2013年

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Direct metal recognition by guanine nucleotide-exchange factor in the initial step of the exchange reaction

Acta Crystallographica Section D-Biological Crystallography    2013年

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Microtubule stability affects the unique motility of F-actin in Marchantia polymorpha

Journal of Plant Research    2013年

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Molecular and biochemical analysis of the first ARA6 homologue, a RAB5 GTPase, from green algae

Journal of Experimental Botany    2013年

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Molecular mechanism of strigolactone perception by DWARF14

Nature Communications    2013年

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RAB5 Activation is Required for Multiple Steps in Arabidopsis thaliana Root Development

Plant and Cell Physiology    2013年

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RABA Members Act in Distinct Steps of Subcellular Trafficking of the FLAGELLIN SENSING2 Receptor

Plant Cell    2013年

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Arabidopsis ARF-GTP exchange factor, GNOM, mediates transport required for innate immunity and focal accumulation of syntaxin PEN1

Proceedings of the National Academy of Sciences of the United States of America    2012年

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Conserved and plant-unique mechanisms regulating plant post-Golgi traffic

Frontiers in Plant Science    2012年

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Dynamic behavior of clathrin in Arabidopsis thaliana unveiled by live imaging

Plant Journal    2012年

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Endosomal trafficking pathway regulated by ARA6, a RAB5 GTPase unique to plants

Small GTPases    2012年

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Flowering Time Modulation by a Vacuolar SNARE via FLOWERING LOCUS C in Arabidopsis thaliana

Plos One    2012年

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Qa-SNAREs localized to the trans-Golgi network regulate multiple transport pathways and extracellular disease resistance in plants

Proceedings of the National Academy of Sciences of the United States of America    2012年

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Statistical organelle dissection of Arabidopsis guard cells using image database LIPS

Scientific Reports    2012年

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cis-Golgi proteins accumulate near the ER exit sites and act as the scaffold for Golgi regeneration after brefeldin A treatment in tobacco BY-2 cells

Molecular Biology of the Cell    2012年

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A membrane trafficking pathway regulated by the plant-specific RAB GTPase ARA6

Nature Cell Biology    2011年

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ANGUSTIFOLIA, a plant homolog of CtBP/BARS, functions outside the nucleus

Plant Journal    2011年

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The occurrence of 'bulbs', a complex configuration of the vacuolar membrane, is affected by mutations of vacuolar SNARE and phospholipase in Arabidopsis

Plant Journal    2011年

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ADP-ribosylation factor machinery mediates endocytosis in plant cells

Proceedings of the National Academy of Sciences of the United States of America    2010年

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Arabidopsis dynamin-related proteins DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis

Proceedings of the National Academy of Sciences of the United States of America    2010年

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Endocytosis restricts Arabidopsis KNOLLE syntaxin to the cell division plane during late cytokinesis

Embo Journal    2010年

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GDP-bound and Nucleotide-free Intermediates of the Guanine Nucleotide Exchange in the Rab5.Vps9 System

Journal of Biological Chemistry    2010年

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The Hop/Sti1-Hsp90 Chaperone Complex Facilitates the Maturation and Transport of a PAMP Receptor in Rice Innate Immunity

Cell Host & Microbe    2010年

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Vacuolar/pre-vacuolar compartment Qa-SNAREs VAM3/SYP22 and PEP12/SYP21 have interchangeable functions in Arabidopsis

Plant Journal    2010年

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Application of Lifeact Reveals F-Actin Dynamics in Arabidopsis thaliana and the Liverwort, Marchantia polymorpha

Plant and Cell Physiology    2009年

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Arabidopsis dynamin-related proteins DRP3A and DRP3B are functionally redundant in mitochondrial fission, but have distinct roles in peroxisomal fission

Plant Journal    2009年

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FUNCTIONS OF RAB AND SNARE PROTEINS IN PLANT LIFE

International Review of Cell and Molecular Biology, Vol 274    2009年

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Phosphoinositide-dependent regulation of VAN3 ARF-GAP localization and activity essential for vascular tissue continuity in plants

Development    2009年

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Unique mechanism of plant endocytic/vacuolar transport pathways

Journal of Plant Research    2009年

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Visualization of Mitochondrial and Apicoplast Nucleoids in the Human Malaria Parasite Plasmodium falciparum by SYBR Green I and PicoGreen Staining

Cytologia    2009年

A SNARE Complex Unique to Seed Plants Is Required for Protein Storage Vacuole Biogenesis and Seed Development of Arabidopsis thaliana

Plant Cell    2008年

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Auxin transport inhibitors impair vesicle motility and actin cytoskeleton dynamics in diverse eukaryotes

Proceedings of the National Academy of Sciences of the United States of America    2008年

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EMBRYO YELLOW gene, encoding a subunit of the conserved oligomeric Golgi complex, is required for appropriate cell expansion and meristem organization in Arabidopsis thaliana

Genes To Cells    2008年

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Generation of cell polarity in plants links endocytosis, auxin distribution and cell fate decisions

Nature    2008年

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Molecular characterization and expression analysis of the Rab GTPase family in Vitis vinifera reveal the specific expression of a VvRabA protein

Journal of Experimental Botany    2008年

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Signal peptide peptidase and its homologs in Arabidopsis thaliana-plant tissue-specific expression and distinct subcellular localization

Febs Journal    2008年

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The regulatory RAB and ARF GTPases for vesicular trafficking

Plant Physiology    2008年

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The Arabidopsis AAA ATPase SKD1 is involved in multivesicular endosome function and interacts with its positive regulator LYST-INTERACTING PROTEIN5

Plant Cell    2007年

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The assembly pathway of the 19S regulatory particle of the yeast 26S proteasome

Molecular Biology of the Cell    2007年

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VPS9a, the common activator for two distinct types of Rab5 GTPases, is essential for the development of Arabidopsis thaliana

Plant Cell    2007年

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Actin-based motility of endosomes is linked to the polar tip growth of root hairs

European Journal of Cell Biology    2005年

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DRP1A is responsible for vascular continuity synergistically working with VAN3 in Arabidopsis

Plant Physiology    2005年

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VAN3 ARF-GAP-mediated vesicle transport is involved in leaf vascular network formation

Development    2005年

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Functional differentiation of endosomes in Arabidopsis cells

Plant Journal    2004年

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Systematic analysis of SNARE molecules in Arabidopsis: Dissection of the post-Golgi network in plant cells

Cell Structure and Function    2004年

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Arabidopsis sterol endocytosis involves actin-mediated trafficking via ARA6-positive early endosomes

Current Biology    2003年

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Cdc50p, a conserved endosomal membrane protein, controls polarized growth in Saccharomyces cerevisiae

Molecular Biology of the Cell    2003年

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The Arabidopsis GNOM ARF-GEF mediates endosomal recycling, auxin transport, and auxin-dependent plant growth

Cell    2003年

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A complex and mobile structure forms a distinct subregion within the continuous vacuolar membrane in young cotyledons of Arabidopsis

Plant Journal    2002年

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Arf1 GTPase plays roles in the protein traffic between the endoplasmic reticulum and the Golgi apparatus in tobacco and Arabidopsis cultured cells

Plant Journal    2002年

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Involvement of the vacuoles of the endodermis in the early process of shoot gravitropism in Arabidopsis

Plant Cell    2002年

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Vesicular traffic: an integral part of plant life

Current Opinion in Plant Biology    2002年

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Ara6, a plant-unique novel type Rab GTPase, functions in the endocytic pathway of Arabidopsis thaliana

Embo Journal    2001年

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Multiple roles of Arf1 GTPase in the yeast exocytic and endocytic pathways

Molecular Biology of the Cell    2001年

A dominant negative mutant of Sar1 GTPase inhibits protein transport from the endoplasmic reticulum to the Golgi apparatus in tobacco and Arabidopsis cultured cells

Plant Journal    2000年

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Modes of interaction between the Arabidopsis Rab protein, Ara4, and its putative regulator molecules revealed by a yeast expression system

Plant Journal    2000年

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Overexpression of PRA2, a Rab/Ypt-family small GTPase from pea Pisum sativum, aggravates the growth defect of yeast ypt mutants

Cell Structure and Function    2000年

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The Arabidopsis thaliana RER1 gene family: its potential role in the endoplasmic reticulum localization of membrane proteins

Plant Molecular Biology    1999年

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AtGDI2, a novel Arabidopsis gene encoding a Rab GDP dissociation inhibitor

Gene    1998年

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The biological roles of small GTPases and interacting proteins in plants

Journal of Plant Research    1998年

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An arabidopsis gene isolated by a novel method for detecting genetic interaction in yeast encodes the GDP dissociation inhibitor of Ara4 GTPase

Plant Cell    1996年

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Brefeldin A induces the accumulation of unusual membrane structures in elongating pollen tubes of Nicotiana tabacum L.

Journal of Plant Physiology    1996年

Characterization and subcellular localization of a small GTP binding protein (Ara-4) from Arabidopsis: Conditional expression under control of the promoter of the gene for heat-shock protein HSP81-1

Molecular & General Genetics    1996年

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IMMUNOLOGICAL ANALYSIS OF A SMALL GTP-BINDING PROTEIN IN HIGHER-PLANT CELLS

Journal of Plant Physiology    1995年

PHENOTYPIC INSTABILITY OF TRANSGENIC TOBACCO PLANTS AND THEIR PROGENIES EXPRESSING ARABIDOPSIS-THALIANA SMALL GTP-BINDING PROTEIN GENES

Molecular & General Genetics    1995年

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